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Table 2 Significant quantitative trait loci associated with drought-related traits for the XSA10098 X XSA10127 biparental population

From: The integration of quantitative trait locus mapping and transcriptome studies reveals candidate genes for water stress response in St. Augustinegrass

QTL

Trait

LG

Peak Position (cM)

% Var

Confidence Interval

Peak Physical Position (bp)

Physical Position Range (bp)

LW-5.1

LW

5

23.66

15.55

16.68–36.06

3,363,900

2,272,746 − 4,598,389

LW-9.2

LW

9

45.27

25.61

37.37–59.13

9,573,540

7,294,000–11,467,984

LW-3.1

LW_20

3

107.43

19.15

101.12–108.19

45,180,406

43,879,062–45,318,615

LW-6.1

LW_20

6

32.35

9.6

20.57–52.29

10,814,818

7,656,452–28,621,279

LW-9.1

LW_20

9

43.19

22.5

38.20–59.13

9,326,977

7,892,898–11,467,984

LW-5.2

LW_21

5

30.31

17.04

16.68–44.13

4,161,518

2,272,746 − 8,515,041

AULWC-2.1

AULWC_20

2

0

28.26

0.00–5.01

8,589,918

8,589,918–10,251,920

AULWC-3.1

AULWC_20

3

101.12

14.92

98.24–108.19

43,879,062

43,307,483–45,318,615

AULWC-9.1

AULWC_20

9

7.11

11.53

7.11–51.01

2,791,778

2,791,593–10,550,638

PGC-2.2

PGC

2

10.24

24.53

0–26.3

11,808,394

8,589,918–17,037,003

PGC-3.2

PGC

3

101.12

12.65

48.31–108.19

43,879,062

21,153,247–45,318,615

PGC-1.1

PGC_20

1

5.31

13.11

5.31–8.71

13,405,134

13,405,134–14,189,176

PGC-2.1

PGC_20

2

2.4

37.06

2.40–3.08

9,330,187

9,330,187–9,524,355

PGC-3.1

PGC_20

3

99.23

12.02

87.32–107.43

43,501,307

40,644,353–45,180,406

PGC-4.1

PGC_20

4

42.27

7.82

34.22–71.06

14,146,107

9,601,868–33,495,704

AUPGCC-2.1

AUPGCC

2

2.4

26.29

0–10.24

9,330,187

8,589,918–11,808,394

AUPGCC-2.2

AUPGCC_20

2

2.4

30.69

0.00–6.12

9,330,187

8,589,918–10,906,196

PR-3.1

PR

3

48.31

14.26

37.06–98.24

21,153,247

18,949,946–43,307,483

PR-9.1

PR

9

43.19

29.08

38.20–54.21

9,326,977

7,892,898–11,027,839

PR-3.2

PR_20

3

98.24

18.3

48.31–108.19

43,307,483

21,153,247–45,318,615

AUPRC-3.1

AUPRC

3

48.31

16.28

41.08–52.54

21,153,247

19,612,007–21,898,037

AUPRC-9.1

AUPRC

9

43.19

27.29

37.37–52.05

9,326,977

7,294,000–10,721,565

RWC-3.1

RWC

3

101.12

15.93

48.31–109.59

43,879,062

21,153,247–45,704,345

RWC-3.2

RWC_20

3

107.43

23.31

96.68–108.19

45,180,406

42,977,450–45,318,615

  1. LG = linkage group, PGC = percent green cover, LW = leaf wilting, PR = percent recovery, RWC = relative water content, AULWC = area under leaf wilting curve, AUPGCC = area under percent green cover curve, AUPRC = area under percent recovery curve. Each trait was analyzed using across years, 2020 and 2021 trial